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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
GBM rs34976342 chr17:26996341 C/G 2.06E-5 146 11.95 7.73 1.2 KM Plot
GBM rs35063966 chr19:8403628 A/G 1.09E-11 143 11.1 15.13 0.73 KM Plot
GBM rs35210193 chr19:8397359 G/A 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs373386430 chr19:8396249 TCCCCTGTCTCCTACAATGCCCCAG/T 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs374754467 chr19:8401498 GCATAATGGTGAGCTA/G 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs377681110 chr17:27038414 CCCCCGGCCCTAGCTCCG/C 3.95E-5 148 11.95 9 1.2 KM Plot
GBM rs3823157 chr6:26272039 A/G 4.11E-11 149 12.37 10.48 0.73 KM Plot
GBM rs3893749 chr16:67533298 A/G 2.26E-7 148 12 9.55 0.97 KM Plot
GBM rs3917411 chr1:169700756 A/T 1.11E-16 149 0.2 11.3 11.18 KM Plot
GBM rs4332847 chr19:8395449 C/T 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs4402532 chr15:84783321 A/C 1.58E-8 146 10.97 13.28 0.87 KM Plot
GBM rs4682534 chr3:114034098 C/T 4.19E-11 149 0.73 13.45 10.93 KM Plot
GBM rs4999701 chr19:8402016 C/A 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs4999702 chr19:8402065 C/T 7.32E-12 145 10.77 15.13 0.73 KM Plot
GBM rs55639853 chr16:67459078 C/G 2.26E-7 148 12 9.55 0.97 KM Plot